Useful software for Modelling Complex Systems

Complexity Science Software Tools

Notes: Not an exhaustive list!

If you have suggestions or comments please email me to add m.h.lees[at]uva.nl.

Specifically looking at tools for:

• Agent-Based Modelling
• Complex Networks
• System Dynamics

All(or multiple)-in-one :

1. NetLogo
2. PyCx
3. AnyLogic

Agent-Based Modelling (List of ones I’ve used)

Java

1. RePast
2. RePast HPC
3. Mason
4. Gamma

Python

1. Mesa

Other

1. Flame
2. SimAgent
3. Agents.jl

Comprehensive List:

Wikipedia

Complex Networks

These are tools for creating/modelling network dynamics and specifically for analysing and visualising networks.

1. NetworkX
2. Graphviz
3. Gephi
4. iGraph
5. Cytoscape
6. Pajek
7. Jung

Comprehensive List: Wikipedia

System Dynamics

These are tools for creating system dynamics models.

1. NetLogo
2. Stella, iThink
3. Pyndynamics
4. Simulink

Comprehensive List:

Wikipedia